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Python 5 1 Updated Apr 3, 2026

Sync reMarkable to PDF and MarkDown via either USB or Wifi. Backup your device and let your AI agents reason over the content.

Python 37 4 Updated Aug 2, 2026

Autonomous Research Manuscript Skills — domain-agnostic pipeline for academic paper production with Claude Code

TeX 25 3 Updated Jun 13, 2026

An opinionated, agentic life-OS for Claude Code — a markdown vault with daily/weekly/quarterly review skills baked in. Includes the feedback layer most templates skip.

Python 30 4 Updated Aug 2, 2026

Local-first code intelligence graph for MCP and CLI. Builds a persistent map of your codebase so AI coding tools read only what matters, with benchmarked context reductions on reviews and large-rep…

Python 28,360 2,628 Updated Aug 2, 2026

Numerical Linear Algebra Notes CME 302 Stanford

Python 33 3 Updated Nov 20, 2025

iMRMC: Software to do multi-reader multi-case analysis of reader studies

Java 31 16 Updated Jul 22, 2026

A reasonable way to allow AI to work with reference managers

Python 87 5 Updated Jul 4, 2026

A children's alphabet book

TeX 7 Updated Mar 29, 2026

Summarize a paper with the FOCUS method

60 6 Updated Mar 26, 2026

Paper2Agent is a multi-agent AI system that automatically transforms research papers into interactive AI agents with minimal human input.

Jupyter Notebook 2,316 347 Updated Feb 10, 2026

Claude Code is an agentic coding tool that lives in your terminal, understands your codebase, and helps you code faster by executing routine tasks, explaining complex code, and handling git workflo…

Python 140,178 22,539 Updated Aug 4, 2026

A professionally curated list of awesome Conformal Prediction videos, tutorials, books, papers, PhD and MSc theses, articles and open-source libraries.

1,274 118 Updated Jul 9, 2026

Watercolor earth Quarto reveal.js theme

SCSS 33 2 Updated May 28, 2025

A Python/R package for fitting linear mixed models for genome-wide association studies among related individuals

HTML 9 Updated Nov 11, 2024

Scripts used for the analyses in out paper, "Bias correction for inverse variance weighting Mendelian randomization"

R 3 Updated Dec 15, 2022

R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples

R 69 12 Updated Jan 9, 2025

Debiased Inverse-Variance Weighted Estimator in Two-Sample Summary-Data Mendelian Randomization

R 10 1 Updated Nov 19, 2025

A curated list of awesome R packages, frameworks and software.

R 6,493 1,517 Updated Sep 18, 2025

Lecture Notes on Design & Analysis of Experiments

TeX 130 56 Updated Sep 1, 2025

A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.

Python 22,211 1,212 Updated Aug 4, 2026

Lecture notes for the "Randomised and Advanced algorithms" class developed for the University of Sydney.

Jupyter Notebook 23 2 Updated Jan 24, 2026

R package to estimate kinship and FST from SNP data

R 21 Updated Jan 27, 2026

Supplement to popkin package

R 4 Updated Apr 28, 2023

Training material for the GWAS Catalog REST API workshop

Jupyter Notebook 13 4 Updated May 22, 2023

Simulate GWAS data from an arbitrary DAG

R 12 8 Updated May 18, 2026

A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.

R 61 5 Updated Jul 20, 2026

A topic-centric list of HQ open datasets.

77,933 11,737 Updated Jul 30, 2026

A list of awesome tools for complex trait genetics.

88 22 Updated Jan 28, 2025
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